Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | FD720_20950 | Not Available | + | 4704318 - 4705535 | 42319.0 |
| nad(p)-dependent oxidoreductase | FD720_20955 | Not Available | - | 4705626 - 4706495 | 31053.1 |
| hypothetical protein | FD720_20960 | Not Available | + | 4706727 - 4707284 | 21398.2 |
| protein translocase subunit secd | FD720_20965 | Not Available | + | 4707472 - 4709295 | 66320.8 |
| protein translocase subunit secf | FD720_20970 | Not Available | + | 4709300 - 4710211 | 32982.5 |
| cystathionine beta-lyase | FD720_20975 | Not Available | + | 4710322 - 4711524 | 44641.2 |
| hypothetical protein | FD720_20980 | Not Available | + | 4711595 - 4711885 | 11010.7 |
| hypothetical protein | FD720_20985 | Not Available | - | 4711915 - 4712178 | 10126.1 |
| cation transporter | FD720_20990 | Not Available | + | 4712505 - 4713443 | 34393.8 |
| lipoate--protein ligase | FD720_20995 | Not Available | - | 4713539 - 4714555 | 38462.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.