Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatc | FD720_20800 | Not Available | - | 4673646 - 4674401 | 28176.0 |
| sec-independent protein translocase subunit tatb | FD720_20805 | Not Available | - | 4674413 - 4674760 | 12986.6 |
| twin-arginine translocase subunit tata | FD720_20810 | Not Available | - | 4674764 - 4675024 | 9464.37 |
| ubiquinone biosynthesis regulatory protein kinase ubib | FD720_20815 | Not Available | - | 4675099 - 4676733 | 63062.4 |
| scp2 domain-containing protein | FD720_20820 | Not Available | - | 4676743 - 4677345 | 22221.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | FD720_20825 | Not Available | - | 4677354 - 4678109 | 28123.8 |
| dna recombination protein rmuc | FD720_20830 | Not Available | - | 4678232 - 4679758 | 57948.8 |
| dmt family transporter | FD720_20835 | Not Available | + | 4679972 - 4680871 | 32829.1 |
| multidrug effflux mfs transporter | FD720_20840 | Not Available | - | 4680942 - 4682144 | 42962.9 |
| aminopeptidase p family protein | FD720_20845 | Not Available | + | 4682395 - 4684185 | 65466.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.