Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | FD720_02075 | Not Available | - | 424558 - 425394 | 30493.9 |
| atp-dependent zinc metalloprotease ftsh | FD720_02080 | Not Available | - | 425463 - 427409 | 71703.2 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | FD720_02085 | Not Available | - | 427459 - 428088 | 23237.1 |
| ribosome assembly rna-binding protein yhby | FD720_02090 | Not Available | + | 428302 - 428598 | 11097.8 |
| transcription elongation factor grea | FD720_02095 | Not Available | - | 428731 - 429204 | 17597.1 |
| porin | FD720_02100 | Not Available | + | 429845 - 430861 | 36974.4 |
| serine-type d-ala-d-ala carboxypeptidase | FD720_02105 | Not Available | + | 430971 - 432365 | 51441.2 |
| magnesium transporter | FD720_02110 | Not Available | - | 432469 - 433320 | 30321.8 |
| carbamoyl-phosphate synthase large subunit | FD720_02115 | Not Available | - | 433887 - 437111 | 117767.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | FD720_02120 | Not Available | - | 437128 - 438267 | 40873.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.