Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | FD720_20750 | Not Available | - | 4662649 - 4663107 | 17591.2 |
| hypothetical protein | FD720_20755 | Not Available | + | 4663183 - 4663629 | 16558.3 |
| dtw domain-containing protein | FD720_20760 | Not Available | + | 4663689 - 4664270 | 22367.8 |
| coniferyl aldehyde dehydrogenase | FD720_20765 | Not Available | + | 4664383 - 4665843 | 54496.1 |
| putrescine-ornithine antiporter | FD720_20770 | Not Available | + | 4666503 - 4667828 | 46709.9 |
| arginine decarboxylase | FD720_20775 | Not Available | + | 4668019 - 4670316 | 85497.4 |
| hypothetical protein | FD720_20780 | Not Available | - | 4670472 - 4670663 | 7365.89 |
| hypothetical protein | FD720_20785 | Not Available | - | 4671039 - 4671386 | 12959.6 |
| porphobilinogen synthase | FD720_20790 | Not Available | - | 4671620 - 4672657 | 38187.9 |
| 3'-5' ssdna/rna exonuclease tatd | FD720_20795 | Not Available | - | 4672786 - 4673574 | 29606.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.