Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2500 domain-containing protein | FD720_20700 | Not Available | + | 4652794 - 4653126 | 12682.5 |
| acyltransferase | FD720_20705 | Not Available | - | 4653136 - 4654149 | 38658.9 |
| sdr family oxidoreductase | FD720_20710 | Not Available | - | 4654249 - 4654971 | 25959.4 |
| abgt family transporter | FD720_20715 | Not Available | + | 4655445 - 4657046 | 56703.5 |
| lysr family transcriptional regulator | FD720_20720 | Not Available | + | 4657159 - 4658007 | 31741.7 |
| patatin family protein | FD720_20725 | Not Available | + | 4658103 - 4658996 | 33118.5 |
| dna starvation/stationary phase protection protein | FD720_20730 | Not Available | + | 4659134 - 4659610 | 18312.9 |
| homoserine/homoserine lactone efflux protein | FD720_20735 | Not Available | - | 4659862 - 4660479 | 21886.3 |
| alpha/beta fold hydrolase | FD720_20740 | Not Available | + | 4660640 - 4661632 | 37865.9 |
| cof-type had-iib family hydrolase | FD720_20745 | Not Available | + | 4661784 - 4662581 | 29435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.