Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate sulfurtransferase glpe | FD720_20650 | Not Available | - | 4644959 - 4645288 | 12373.5 |
| rna polymerase sigma factor rpoh | FD720_20655 | Not Available | - | 4645861 - 4646724 | 32829.9 |
| cell division protein ftsx | FD720_20660 | Not Available | - | 4646870 - 4647739 | 32134.7 |
| cell division atp-binding protein ftse | FD720_20665 | Not Available | - | 4647783 - 4648454 | 25027.6 |
| signal recognition particle-docking protein ftsy | FD720_20670 | Not Available | - | 4648458 - 4649846 | 50373.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | FD720_20675 | Not Available | + | 4649931 - 4650539 | 22830.2 |
| duf1145 domain-containing protein | FD720_20680 | Not Available | + | 4650536 - 4650802 | 9973.06 |
| duf2492 family protein | FD720_20685 | Not Available | - | 4650876 - 4651118 | 9040.82 |
| hypothetical protein | FD720_20690 | Not Available | + | 4651912 - 4651992 | 2900.87 |
| duf4145 domain-containing protein | FD720_20695 | Not Available | - | 4652094 - 4652459 | 14238.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.