Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | FD720_20550 | Not Available | - | 4624412 - 4626040 | 60209.1 |
| hypothetical protein | FD720_20555 | Not Available | - | 4626156 - 4626491 | 13034.9 |
| hypothetical protein | FD720_20560 | Not Available | - | 4626804 - 4627115 | 11510.0 |
| cytochrome oxidase | FD720_20565 | Not Available | - | 4627125 - 4627715 | 21996.3 |
| surf1 family protein | FD720_20570 | Not Available | - | 4627699 - 4628421 | 28386.8 |
| duf2909 domain-containing protein | FD720_20575 | Not Available | + | 4628488 - 4628694 | 7659.02 |
| cytochrome c oxidase subunit 3 | FD720_20580 | Not Available | - | 4628698 - 4629573 | 32670.5 |
| cytochrome c oxidase assembly protein | FD720_20585 | Not Available | - | 4629583 - 4630179 | 21601.9 |
| cytochrome c oxidase subunit i | FD720_20590 | Not Available | - | 4630189 - 4631805 | 59832.3 |
| cytochrome c oxidase subunit ii | FD720_20595 | Not Available | - | 4631816 - 4632961 | 43011.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.