Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphorylase | FD720_20495 | Not Available | + | 4610637 - 4611443 | 30714.8 |
| nlpc/p60 family protein | FD720_20500 | Not Available | - | 4611509 - 4612036 | 19605.0 |
| miniconductance mechanosensitive channel mscm | FD720_20510 | Not Available | + | 4613534 - 4616842 | 126411.0 |
| class i poly(r)-hydroxyalkanoic acid synthase | FD720_20515 | Not Available | - | 4616931 - 4618703 | 67432.2 |
| phasin family protein | FD720_20520 | Not Available | - | 4618763 - 4619110 | 13199.8 |
| acetyl-coa c-acetyltransferase | FD720_20525 | Not Available | - | 4619155 - 4620360 | 41458.1 |
| sdr family oxidoreductase | FD720_20530 | Not Available | - | 4620374 - 4621114 | 26340.8 |
| l-alanine exporter alae | FD720_20535 | Not Available | - | 4621446 - 4621898 | 16595.5 |
| ofa family mfs transporter | FD720_20540 | Not Available | - | 4622213 - 4623424 | 42627.3 |
| response regulator transcription factor | FD720_20545 | Not Available | - | 4623674 - 4624393 | 27645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.