Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | FD720_20445 | Not Available | + | 4600321 - 4601949 | 59393.4 |
| lysr family transcriptional regulator | FD720_20450 | Not Available | + | 4602055 - 4602975 | 34868.9 |
| nupc/nupg family nucleoside cnt transporter | FD720_20455 | Not Available | + | 4603364 - 4604587 | 42909.6 |
| hypothetical protein | FD720_20460 | Not Available | + | 4604750 - 4605025 | 10663.9 |
| duf805 domain-containing protein | FD720_20465 | Not Available | + | 4605046 - 4605441 | 14956.4 |
| coa-disulfide reductase | FD720_20470 | Not Available | - | 4605527 - 4607179 | 60185.7 |
| yeee/yede family protein | FD720_20475 | Not Available | + | 4607409 - 4607813 | 14154.9 |
| yeee/yede family protein | FD720_20480 | Not Available | + | 4607830 - 4608264 | 15419.5 |
| hypothetical protein | FD720_20485 | Not Available | + | 4608345 - 4608581 | 8601.37 |
| tyrosine transporter | FD720_20490 | Not Available | + | 4609082 - 4610260 | 41490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.