Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_20135 | Not Available | + | 4531718 - 4532488 | 29172.2 |
| duf1097 domain-containing protein | FD720_20140 | Not Available | + | 4532644 - 4533126 | 17008.2 |
| efflux rnd transporter periplasmic adaptor subunit | FD720_20145 | Not Available | + | 4533537 - 4534670 | 40577.7 |
| efflux rnd transporter permease subunit | FD720_20150 | Not Available | + | 4534680 - 4537835 | 113546.0 |
| hcp family type vi secretion system effector | FD720_20155 | Not Available | + | 4538163 - 4538681 | 19127.6 |
| type vi secretion system tip protein vgrg | FD720_20160 | Not Available | + | 4538787 - 4540808 | 74853.6 |
| duf4123 domain-containing protein | FD720_20165 | Not Available | + | 4540805 - 4541656 | 32907.4 |
| hypothetical protein | FD720_20170 | Not Available | + | 4541646 - 4544783 | 116174.0 |
| hypothetical protein | FD720_20175 | Not Available | + | 4544789 - 4545496 | 26923.1 |
| dmt family transporter | FD720_20180 | Not Available | - | 4545600 - 4546496 | 32263.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.