Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | FD720_20085 | Not Available | - | 4521117 - 4522514 | 50939.6 |
| mate family efflux transporter | FD720_20090 | Not Available | - | 4522737 - 4524095 | 49426.8 |
| hypothetical protein | FD720_20095 | Not Available | - | 4524185 - 4524802 | 24124.2 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | FD720_20100 | Not Available | - | 4524907 - 4525527 | 23796.5 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | FD720_20105 | Not Available | - | 4525527 - 4526540 | 38271.9 |
| hypothetical protein | FD720_20110 | Not Available | + | 4526670 - 4527125 | 17715.3 |
| lysm peptidoglycan-binding domain-containing protein | FD720_20115 | Not Available | + | 4527310 - 4528212 | 32984.6 |
| hypothetical protein | FD720_20120 | Not Available | + | 4528359 - 4528811 | 17244.3 |
| cation diffusion facilitator family transporter | FD720_20125 | Not Available | + | 4529126 - 4530043 | 34151.3 |
| beta-n-acetylhexosaminidase | FD720_20130 | Not Available | - | 4530501 - 4531505 | 36899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.