Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | FD720_19880 | Not Available | + | 4464453 - 4465382 | 33302.8 |
| dimethylsulfoxide reductase | FD720_19885 | Not Available | - | 4466160 - 4466918 | 27373.4 |
| pyrimidine-specific ribonucleoside hydrolase riha | FD720_19890 | Not Available | + | 4467248 - 4468186 | 34027.0 |
| nad-dependent malic enzyme | FD720_19895 | Not Available | - | 4468294 - 4470009 | 63702.0 |
| lysr family transcriptional regulator | FD720_19900 | Not Available | + | 4470309 - 4471112 | 28852.9 |
| d-ribose pyranase | FD720_19905 | Not Available | + | 4471735 - 4472154 | 15158.4 |
| ribose abc transporter atp-binding protein rbsa | FD720_19910 | Not Available | + | 4472213 - 4473718 | 54811.6 |
| ribose abc transporter permease | FD720_19915 | Not Available | + | 4473715 - 4474701 | 34504.1 |
| ribose abc transporter substrate-binding protein rbsb | FD720_19920 | Not Available | + | 4474775 - 4475653 | 30677.0 |
| ribokinase | FD720_19925 | Not Available | + | 4475833 - 4476753 | 32102.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.