Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiaminase ii | FD720_19830 | Not Available | + | 4452462 - 4453121 | 24897.6 |
| trka family potassium uptake protein | FD720_19835 | Not Available | + | 4453536 - 4454198 | 24079.5 |
| ktr system potassium transporter b | FD720_19840 | Not Available | + | 4454195 - 4455562 | 49298.8 |
| hypothetical protein | FD720_19845 | Not Available | - | 4455619 - 4456452 | 31837.3 |
| sm-20 protein | FD720_19850 | Not Available | + | 4456673 - 4457275 | 23787.0 |
| endonuclease/exonuclease/phosphatase family protein | FD720_19855 | Not Available | + | 4457473 - 4458852 | 50652.2 |
| cytochrome c | FD720_19860 | Not Available | + | 4459177 - 4460271 | 40457.7 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | FD720_19865 | Not Available | + | 4460293 - 4462740 | 90175.2 |
| vanz family protein | FD720_19870 | Not Available | + | 4462881 - 4463243 | 13497.0 |
| mfs transporter | FD720_19875 | Not Available | - | 4463274 - 4463960 | 25474.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.