Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | FD720_19780 | Not Available | + | 4441287 - 4442765 | 54278.4 |
| atp-dependent rna helicase dbpa | FD720_19785 | Not Available | - | 4442841 - 4444232 | 50718.4 |
| antibiotic biosynthesis monooxygenase | FD720_19790 | Not Available | - | 4444363 - 4444665 | 11698.5 |
| alkaline phosphatase | FD720_19795 | Not Available | - | 4444858 - 4446435 | 57310.0 |
| duf229 domain-containing protein | FD720_19800 | Not Available | - | 4446642 - 4448261 | 60537.1 |
| carboxymuconolactone decarboxylase family protein | FD720_19805 | Not Available | - | 4448457 - 4448687 | 8657.54 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | FD720_19810 | Not Available | + | 4449031 - 4449864 | 29245.1 |
| abc transporter atp-binding protein | FD720_19815 | Not Available | + | 4449874 - 4450641 | 28760.8 |
| abc transporter permease | FD720_19820 | Not Available | + | 4450634 - 4451425 | 29121.3 |
| abc transporter atp-binding protein | FD720_19825 | Not Available | + | 4451460 - 4452407 | 34745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.