Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | FD720_01960 | Not Available | + | 401260 - 401736 | 17586.0 |
| phospholipase d family protein | FD720_01965 | Not Available | - | 401812 - 403359 | 57832.5 |
| preprotein translocase subunit secy | FD720_01970 | Not Available | - | 403550 - 404575 | 37738.3 |
| hypothetical protein | FD720_01975 | Not Available | + | 404934 - 405182 | 9308.97 |
| l-asparaginase 2 | FD720_01980 | Not Available | + | 405444 - 406508 | 37995.2 |
| hypothetical protein | FD720_01985 | Not Available | - | 406588 - 406881 | 10752.5 |
| branched-chain amino acid transport system ii carrier protein | FD720_01990 | Not Available | - | 406974 - 408317 | 47317.2 |
| hypothetical protein | FD720_02000 | Not Available | - | 409168 - 410010 | 32334.6 |
| n-acetylmuramoyl-l-alanine amidase | FD720_02005 | Not Available | - | 410219 - 410836 | 23327.8 |
| mbl fold metallo-hydrolase | FD720_02010 | Not Available | + | 411086 - 412483 | 51619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.