Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | FD720_19675 | Not Available | - | 4420030 - 4420890 | 33236.4 |
| proline--trna ligase | FD720_19680 | Not Available | - | 4421086 - 4422804 | 63301.5 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | FD720_19685 | Not Available | - | 4422936 - 4423634 | 25701.5 |
| type b 50s ribosomal protein l31 | FD720_19690 | Not Available | + | 4423757 - 4424017 | 10012.8 |
| 50s ribosomal protein l36 | FD720_19695 | Not Available | + | 4424017 - 4424160 | 5484.96 |
| metq/nlpa family lipoprotein | FD720_19700 | Not Available | - | 4424242 - 4425066 | 29637.2 |
| abc transporter permease | FD720_19705 | Not Available | - | 4425135 - 4425821 | 23847.3 |
| methionine abc transporter atp-binding protein metn | FD720_19710 | Not Available | - | 4425811 - 4426845 | 37638.8 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | FD720_19715 | Not Available | + | 4427193 - 4427747 | 20493.3 |
| hypothetical protein | FD720_19720 | Not Available | - | 4427821 - 4428828 | 36830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.