Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | FD720_19625 | Not Available | + | 4408300 - 4409088 | 28438.0 |
| lipid-a-disaccharide synthase | FD720_19630 | Not Available | + | 4409088 - 4410230 | 42635.2 |
| ribonuclease hii | FD720_19635 | Not Available | + | 4410236 - 4410841 | 22066.7 |
| dna polymerase iii subunit alpha | FD720_19640 | Not Available | + | 4410959 - 4414438 | 129993.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | FD720_19645 | Not Available | + | 4414504 - 4415463 | 35220.5 |
| trna lysidine(34) synthetase tils | FD720_19650 | Not Available | + | 4415555 - 4416931 | 52106.3 |
| d-alanine--d-alanine ligase | FD720_19655 | Not Available | + | 4417083 - 4417994 | 33388.2 |
| transposase | FD720_19660 | Not Available | + | 4418199 - 4419410 | 42913.3 |
| duf4250 domain-containing protein | FD720_19665 | Not Available | - | 4419494 - 4419682 | 7291.86 |
| yaep family protein | FD720_19670 | Not Available | - | 4419686 - 4419889 | 7392.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.