Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | FD720_19575 | Not Available | + | 4397871 - 4398599 | 26086.7 |
| ribosome recycling factor | FD720_19580 | Not Available | + | 4398659 - 4399216 | 20767.1 |
| isoprenyl transferase | FD720_19585 | Not Available | + | 4399297 - 4400061 | 28545.3 |
| cdp-diglyceride synthetase | FD720_19590 | Not Available | + | 4400167 - 4401015 | 30531.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | FD720_19595 | Not Available | + | 4401077 - 4402273 | 42944.1 |
| sigma e protease regulator rsep | FD720_19600 | Not Available | + | 4402270 - 4403625 | 49186.3 |
| outer membrane protein assembly factor bama | FD720_19605 | Not Available | + | 4403662 - 4406085 | 90141.7 |
| molecular chaperone | FD720_19610 | Not Available | + | 4406106 - 4406615 | 18896.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | FD720_19615 | Not Available | + | 4406720 - 4407748 | 36194.6 |
| 3-hydroxyacyl-acp dehydratase fabz | FD720_19620 | Not Available | + | 4407848 - 4408303 | 17018.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.