Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:alanine symporter family protein | FD720_19470 | Not Available | - | 4368494 - 4369900 | 49770.8 |
| glycoside hydrolase family 18 protein | FD720_19475 | Not Available | - | 4370406 - 4371716 | 48888.0 |
| arac family transcriptional regulator | FD720_19480 | Not Available | + | 4372169 - 4372873 | 26691.1 |
| efflux rnd transporter permease subunit | FD720_19485 | Not Available | - | 4372865 - 4375960 | 112999.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD720_19490 | Not Available | - | 4375953 - 4377044 | 40459.8 |
| tetr/acrr family transcriptional regulator | FD720_19495 | Not Available | + | 4377209 - 4377838 | 23809.8 |
| hypothetical protein | FD720_19500 | Not Available | + | 4377971 - 4378369 | 13690.4 |
| hypothetical protein | FD720_19505 | Not Available | + | 4378636 - 4379031 | 14956.0 |
| duf4092 domain-containing protein | FD720_19510 | Not Available | + | 4379259 - 4383755 | 167370.0 |
| nitric-oxide reductase large subunit | FD720_19520 | Not Available | - | 4384978 - 4387242 | 84393.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.