Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_19370 | Not Available | + | 4345011 - 4345577 | 21948.9 |
| phenylalanyl-trna synthetase subunit alpha | FD720_19375 | Not Available | - | 4345799 - 4346050 | 9085.7 |
| phenylalanine--trna ligase subunit alpha | FD720_19380 | Not Available | + | 4346351 - 4347334 | 37280.4 |
| phenylalanine--trna ligase subunit beta | FD720_19385 | Not Available | + | 4347354 - 4349741 | 86256.5 |
| integration host factor subunit alpha | FD720_19390 | Not Available | + | 4350265 - 4350561 | 11130.4 |
| succinylglutamate desuccinylase | FD720_19395 | Not Available | + | 4350824 - 4351855 | 38944.2 |
| vitamin b12 abc transporter permease btuc | FD720_19400 | Not Available | + | 4351939 - 4352934 | 35723.8 |
| vitamin b12 abc transporter atp-binding protein btud | FD720_19405 | Not Available | + | 4352934 - 4353695 | 27679.9 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | FD720_19410 | Not Available | + | 4353794 - 4354933 | 42428.1 |
| fusc family protein | FD720_19415 | Not Available | - | 4354987 - 4356030 | 40188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.