Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | FD720_19220 | Not Available | + | 4307695 - 4310193 | 92930.5 |
| hypothetical protein | FD720_19225 | Not Available | + | 4310207 - 4311097 | 33730.1 |
| hypothetical protein | FD720_19230 | Not Available | - | 4311094 - 4311594 | 18650.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | FD720_19235 | Not Available | - | 4311771 - 4312244 | 17249.0 |
| gnat family n-acetyltransferase | FD720_19240 | Not Available | - | 4312301 - 4312852 | 20976.6 |
| transcription-repair coupling factor | FD720_19245 | Not Available | - | 4312968 - 4316426 | 130749.0 |
| pilz domain-containing protein | FD720_19250 | Not Available | - | 4316426 - 4317007 | 22413.4 |
| lipoprotein-releasing abc transporter permease subunit lolc | FD720_19255 | Not Available | + | 4317207 - 4318415 | 43756.0 |
| lipoprotein-releasing abc transporter atp-binding protein lold | FD720_19260 | Not Available | + | 4318408 - 4319097 | 25426.6 |
| lipoprotein-releasing abc transporter permease subunit lole | FD720_19265 | Not Available | + | 4319097 - 4320341 | 45325.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.