Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iib | FD720_01750 | Not Available | - | 353653 - 353961 | 10946.4 |
| efflux rnd transporter permease subunit | FD720_01755 | Not Available | - | 354111 - 357233 | 113537.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD720_01760 | Not Available | - | 357233 - 358342 | 39645.5 |
| hypothetical protein | FD720_01765 | Not Available | - | 358662 - 358847 | 7290.72 |
| Trna-tyr | Not Available | Not Available | + | 358949 - 359033 | Not Available |
| retention module-containing protein | FD720_01775 | Not Available | - | 359046 - 359773 | 25617.7 |
| tolc family outer membrane protein | FD720_01780 | Not Available | + | 360069 - 361361 | 48088.5 |
| ompa family protein | FD720_01785 | Not Available | + | 361365 - 361955 | 21858.2 |
| hypothetical protein | FD720_01790 | Not Available | + | 361973 - 362195 | 7167.87 |
| hypothetical protein | FD720_01795 | Not Available | + | 362379 - 363743 | 53481.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.