Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative basic amino acid antiporter yfcc | FD720_01700 | Not Available | - | 341361 - 342905 | 55207.2 |
| pyroglutamyl-peptidase i | FD720_01705 | Not Available | + | 343289 - 343927 | 22700.1 |
| hypothetical protein | FD720_01710 | Not Available | + | 344091 - 344852 | 28916.6 |
| duf393 domain-containing protein | FD720_01715 | Not Available | + | 344954 - 345343 | 15180.2 |
| chorismate synthase | FD720_01720 | Not Available | - | 345991 - 347079 | 39400.8 |
| pts fructose transporter subunit iic | FD720_01725 | Not Available | - | 347214 - 349118 | 65739.7 |
| phospholipase | FD720_01730 | Not Available | - | 349526 - 350380 | 32666.9 |
| mannose-6-phosphate isomerase, class i | FD720_01735 | Not Available | - | 350611 - 351777 | 42472.2 |
| helix-turn-helix transcriptional regulator | FD720_01740 | Not Available | - | 351987 - 352829 | 32702.3 |
| hypothetical protein | FD720_01745 | Not Available | - | 352826 - 353632 | 30365.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.