Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding protein | FD720_01650 | Not Available | - | 327469 - 328953 | 54967.9 |
| c-type cytochrome | FD720_01655 | Not Available | + | 329235 - 329558 | 12141.7 |
| cytochrome-c oxidase, cbb3-type subunit i | FD720_01660 | Not Available | + | 329595 - 331007 | 54504.1 |
| cytochrome-c oxidase, cbb3-type subunit ii | FD720_01665 | Not Available | + | 331009 - 331608 | 22305.9 |
| cytochrome-c oxidase, cbb3-type subunit iii | FD720_01670 | Not Available | + | 331619 - 333823 | 80981.1 |
| sulfite exporter taue/safe family protein | FD720_01675 | Not Available | - | 333828 - 334559 | 26360.5 |
| lysr family transcriptional regulator | FD720_01680 | Not Available | - | 334816 - 335742 | 35506.9 |
| dead/deah box helicase | FD720_01685 | Not Available | - | 335896 - 337179 | 47737.1 |
| trimethylamine-n-oxide reductase | FD720_01690 | Not Available | - | 337279 - 339945 | 98574.5 |
| succinylglutamate desuccinylase/aspartoacylase family protein | FD720_01695 | Not Available | - | 340273 - 341286 | 37428.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.