Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD720_01445 | Not Available | + | 283692 - 284840 | 44828.1 |
| glycosyltransferase family 1 protein | FD720_01450 | Not Available | + | 284840 - 285919 | 42301.2 |
| glycosyltransferase | FD720_01455 | Not Available | + | 285912 - 286727 | 31760.4 |
| nucleotide sugar dehydrogenase | FD720_01460 | Not Available | + | 286735 - 287901 | 43554.1 |
| nad-dependent epimerase | FD720_01465 | Not Available | + | 287965 - 288969 | 37796.8 |
| utp--glucose-1-phosphate uridylyltransferase galu | FD720_01470 | Not Available | + | 289041 - 289940 | 32806.9 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | FD720_01475 | Not Available | - | 290107 - 290967 | 30812.4 |
| Trna-arg | Not Available | Not Available | + | 291225 - 291301 | Not Available |
| trigger factor | FD720_01485 | Not Available | + | 291815 - 293113 | 47536.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | FD720_01490 | Not Available | + | 293219 - 293842 | 22932.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.