Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetracycline efflux mfs transporter tet(b) | FD720_01180 | Not Available | + | 223288 - 224493 | 43248.8 |
| tetracyline resistance-associated transcriptional repressor tetc | FD720_01185 | Not Available | - | 224606 - 225199 | 22747.6 |
| helix-turn-helix domain-containing protein | FD720_01190 | Not Available | + | 225287 - 225679 | 15765.1 |
| hypothetical protein | FD720_01195 | Not Available | - | 225776 - 227472 | 59974.6 |
| qace family quaternary ammonium compound efflux smr transporter | FD720_01200 | Not Available | - | 227473 - 227533 | 2118.73 |
| mbl fold metallo-hydrolase | FD720_01210 | Not Available | - | 228017 - 228658 | 23672.5 |
| hypothetical protein | FD720_01215 | Not Available | - | 228898 - 229140 | 9429.71 |
| is30-like element isva6 family transposase | FD720_01220 | Not Available | + | 229081 - 230049 | 38501.1 |
| is1380 family transposase | FD720_01225 | Not Available | - | 230034 - 231254 | 46814.4 |
| hypothetical protein | FD720_01230 | Not Available | - | 231351 - 231543 | 7004.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.