Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | FD720_01125 | Not Available | - | 211969 - 213141 | 43826.4 |
| ribosome-associated translation inhibitor raia | FD720_01130 | Not Available | - | 213219 - 213578 | 13676.3 |
| outer membrane protein assembly factor bamd | FD720_01135 | Not Available | - | 213982 - 214710 | 27965.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | FD720_01140 | Not Available | + | 214879 - 215853 | 36698.4 |
| peptidoglycan editing factor pgef | FD720_01145 | Not Available | + | 215853 - 216587 | 26679.7 |
| atp-dependent chaperone clpb | FD720_01150 | Not Available | + | 216755 - 219328 | 95660.9 |
| antibiotic biosynthesis monooxygenase | FD720_01160 | Not Available | + | 221212 - 221532 | 12500.9 |
| amino acid-binding protein | FD720_01165 | Not Available | + | 221525 - 221911 | 13818.9 |
| winged helix-turn-helix transcriptional regulator | FD720_01170 | Not Available | + | 221919 - 222605 | 25297.6 |
| tetr family transcriptional regulator | FD720_01175 | Not Available | - | 222583 - 223209 | 23487.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.