Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | FD720_01025 | Not Available | + | 190998 - 191951 | 33688.0 |
| deda family protein | FD720_01030 | Not Available | + | 191972 - 192418 | 16255.1 |
| insulinase family protein | FD720_01035 | Not Available | + | 192431 - 195277 | 105243.0 |
| glutamate--cysteine ligase | FD720_01040 | Not Available | + | 195432 - 196997 | 59227.9 |
| hypothetical protein | FD720_01045 | Not Available | + | 197121 - 197732 | 23824.2 |
| s-ribosylhomocysteine lyase | FD720_01050 | Not Available | + | 197771 - 198286 | 18949.9 |
| duf21 domain-containing protein | FD720_01055 | Not Available | - | 198390 - 199667 | 47315.1 |
| inner membrane protein ypjd | FD720_01060 | Not Available | - | 199710 - 200507 | 29145.2 |
| signal recognition particle protein | FD720_01065 | Not Available | + | 200709 - 202076 | 50102.5 |
| 30s ribosomal protein s16 | FD720_01070 | Not Available | + | 202248 - 202499 | 9163.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.