Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | FD720_00875 | Not Available | - | 157840 - 158322 | 18048.9 |
| ubiquinone-binding protein | FD720_00880 | Not Available | + | 158516 - 158950 | 15870.2 |
| rnfh family protein | FD720_00885 | Not Available | + | 158940 - 159236 | 11345.7 |
| outer membrane protein assembly factor bame | FD720_00890 | Not Available | - | 159342 - 159698 | 13467.2 |
| dna repair protein recn | FD720_00895 | Not Available | - | 159954 - 161621 | 62215.3 |
| nad(+) kinase | FD720_00900 | Not Available | - | 161814 - 162695 | 32224.7 |
| nucleotide exchange factor grpe | FD720_00905 | Not Available | + | 162915 - 163535 | 22890.1 |
| molecular chaperone dnak | FD720_00910 | Not Available | + | 163750 - 165666 | 68864.5 |
| molecular chaperone dnaj | FD720_00915 | Not Available | + | 165763 - 166902 | 40995.6 |
| type iv pilin protein | FD720_00920 | Not Available | - | 166961 - 167353 | 14292.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.