Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | FD720_00810 | Not Available | - | 143460 - 144491 | 39001.3 |
| fad-binding oxidoreductase | FD720_00815 | Not Available | + | 144687 - 145967 | 47665.7 |
| Trna-ser | Not Available | Not Available | + | 146106 - 146196 | Not Available |
| recombinase family protein | FD720_00835 | Not Available | - | 148634 - 149179 | 20085.2 |
| duf4123 domain-containing protein | FD720_00845 | Not Available | + | 149931 - 150560 | 24108.7 |
| lysm peptidoglycan-binding domain-containing protein | FD720_00850 | Not Available | + | 150557 - 152743 | 80533.6 |
| dna phosphorothioation-associated putative methyltransferase | FD720_00855 | Not Available | - | 153270 - 155294 | 78586.0 |
| type ii toxin-antitoxin system hipa family toxin | FD720_00860 | Not Available | - | 155518 - 156819 | 48726.1 |
| type ii toxin-antitoxin system antitoxin hipb | FD720_00865 | Not Available | - | 156819 - 157067 | 9352.2 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | + | 157348 - 157717 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.