Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | FD720_00710 | Not Available | + | 123822 - 125171 | 48811.3 |
| hd domain-containing protein | FD720_00715 | Not Available | + | 125239 - 125868 | 23748.3 |
| site-specific dna-methyltransferase | FD720_00720 | Not Available | - | 125857 - 126531 | 26226.4 |
| alpha/beta fold hydrolase | FD720_00725 | Not Available | + | 126678 - 127490 | 30103.5 |
| isoprenylcysteine carboxylmethyltransferase family protein | FD720_00730 | Not Available | + | 127603 - 128061 | 17816.6 |
| hypothetical protein | FD720_00735 | Not Available | - | 128294 - 128812 | 19316.7 |
| hypothetical protein | FD720_00740 | Not Available | - | 129283 - 129666 | 14570.4 |
| hypothetical protein | FD720_00745 | Not Available | - | 130055 - 130302 | 9264.29 |
| hypothetical protein | FD720_00750 | Not Available | - | 130313 - 131446 | 42081.8 |
| type ii and iii secretion system protein | FD720_00755 | Not Available | - | 131443 - 132903 | 52519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.