Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | FD720_00660 | Not Available | - | 113966 - 115032 | 38968.4 |
| winged helix-turn-helix domain-containing protein | FD720_00665 | Not Available | + | 115033 - 115226 | 7127.83 |
| yhgn family naat transporter | FD720_00670 | Not Available | - | 115283 - 115888 | 22341.5 |
| gnat family n-acetyltransferase | FD720_00675 | Not Available | - | 116564 - 117064 | 18907.6 |
| molybdate abc transporter substrate-binding protein | FD720_00680 | Not Available | + | 117505 - 118272 | 27721.2 |
| hypothetical protein | FD720_00685 | Not Available | + | 118370 - 118882 | 18406.9 |
| n-acetylglucosamine-6-phosphate deacetylase | FD720_00690 | Not Available | - | 118977 - 120110 | 41292.6 |
| mfs transporter | FD720_00695 | Not Available | + | 120322 - 121692 | 49107.6 |
| retention module-containing protein | FD720_00700 | Not Available | + | 121797 - 122893 | 40083.1 |
| sam-dependent methyltransferase | FD720_00705 | Not Available | + | 123100 - 123678 | 22036.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.