Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 70dps-OG12
Accession NumberVANF00000000.1
Gene Summary
Adenine Count
1421183 bp
Thymine Count
1422141 bp
Guanine Count
969435 bp
Cytosine Count
965266 bp
Genome Length
4778025 bp
Protein-coding Genes
4156 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | FD720_00505 | Not Available | + | 86850 - 87973 | 43311.9 |
| hypothetical protein | FD720_00510 | Not Available | - | 88080 - 88841 | 29498.7 |
| dna topoisomerase iii | FD720_00515 | Not Available | - | 88954 - 91161 | 81872.6 |
| hypothetical protein | FD720_00520 | Not Available | - | 91162 - 91464 | 10869.8 |
| hypothetical protein | FD720_00525 | Not Available | - | 91446 - 92219 | 28715.7 |
| hypothetical protein | FD720_00530 | Not Available | - | 92224 - 92463 | 8864.31 |
| conjugal transfer protein trai | FD720_00535 | Not Available | + | 92627 - 95701 | 113292.0 |
| conjugative transfer system coupling protein trad | FD720_00540 | Not Available | + | 95708 - 97576 | 69498.3 |
| hypothetical protein | FD720_00545 | Not Available | + | 97586 - 98170 | 22290.7 |
| duf4400 domain-containing protein | FD720_00550 | Not Available | + | 98127 - 98756 | 24150.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.