Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. KC-Na-1
Accession NumberNZ_CP021154.1
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trbc/virb2 family protein | CAY62_RS20435 | Not Available | + | 11355 - 11654 | 10587.2 |
| virb4 family type iv secretion/conjugal transfer atpase | CAY62_RS20445 | Not Available | + | 12006 - 14438 | 91626.2 |
| virb8 family protein | CAY62_RS20450 | Not Available | + | 14431 - 15141 | 26949.1 |
| p-type conjugative transfer protein virb9 | CAY62_RS20455 | Not Available | + | 15141 - 16028 | 32449.4 |
| type iv secretion system protein virb10 | CAY62_RS20460 | Not Available | + | 16028 - 17200 | 42544.9 |
| p-type dna transfer atpase virb11 | CAY62_RS20465 | Not Available | + | 17160 - 18191 | 38583.6 |
| hypothetical protein | CAY62_RS20470 | Not Available | + | 18201 - 18431 | 8405.09 |
| type iv secretory system conjugative dna transfer family protein | CAY62_RS20475 | Not Available | + | 18428 - 20284 | 69876.7 |
| hypothetical protein | CAY62_RS20480 | Not Available | + | 20296 - 21147 | 31887.9 |
| type ii secretion system protein gspd | CAY62_RS20485 | Not Available | + | 21147 - 22607 | 52885.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.