Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | FD721_03475 | Not Available | - | 763337 - 764392 | 37739.5 |
| nicotinamide-nucleotide amidase | FD721_03480 | Not Available | - | 764530 - 765018 | 17210.4 |
| dna mismatch repair protein muts | FD721_03485 | Not Available | + | 765231 - 767834 | 96252.4 |
| rna polymerase sigma factor rpos | FD721_03490 | Not Available | - | 767984 - 768985 | 37642.4 |
| lysm peptidoglycan-binding domain-containing protein | FD721_03495 | Not Available | - | 769039 - 769875 | 30174.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | FD721_03500 | Not Available | - | 769879 - 770508 | 23124.8 |
| trna pseudouridine(13) synthase trud | FD721_03505 | Not Available | - | 770625 - 771668 | 39015.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | FD721_03510 | Not Available | - | 771684 - 772157 | 16641.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | FD721_03515 | Not Available | - | 772157 - 772864 | 25014.0 |
| cell division protein ftsb | FD721_03520 | Not Available | - | 772907 - 773194 | 11034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.