Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m23 | FD721_02145 | Not Available | - | 457260 - 458561 | 48542.1 |
| tyrosine--trna ligase | FD721_02150 | Not Available | + | 458689 - 459876 | 44348.7 |
| deda family protein | FD721_02155 | Not Available | + | 459977 - 460582 | 22371.3 |
| trimeric intracellular cation channel family protein | FD721_02160 | Not Available | - | 460655 - 461269 | 21720.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | FD721_02165 | Not Available | - | 461386 - 462219 | 31205.3 |
| cobalamin biosynthesis family protein | FD721_02170 | Not Available | - | 462220 - 463179 | 35644.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | FD721_02175 | Not Available | - | 463179 - 463877 | 24765.8 |
| glutamate synthase small subunit | FD721_02180 | Not Available | - | 464004 - 465422 | 52141.3 |
| glutamate synthase large subunit | FD721_02185 | Not Available | - | 465434 - 469894 | 163389.0 |
| glutamate synthase subunit beta | FD721_02190 | Not Available | - | 470119 - 471585 | 53173.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.