Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FD721_02095 | Not Available | - | 441801 - 442772 | 36076.0 |
| abc transporter permease | FD721_02100 | Not Available | - | 442772 - 443797 | 36802.6 |
| abc transporter permease | FD721_02105 | Not Available | - | 443800 - 444786 | 36478.4 |
| abc transporter substrate-binding protein | FD721_02110 | Not Available | - | 444933 - 446609 | 63158.7 |
| response regulator | FD721_02115 | Not Available | - | 447310 - 450702 | 127239.0 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | FD721_02120 | Not Available | - | 451016 - 452035 | 37543.8 |
| ai-2e family transporter | FD721_02125 | Not Available | - | 452235 - 453323 | 40100.1 |
| glutamate-1-semialdehyde-2,1-aminomutase | FD721_02130 | Not Available | - | 453696 - 454988 | 45849.0 |
| h(+)/cl(-) exchange transporter clca | FD721_02135 | Not Available | + | 455349 - 456749 | 50106.6 |
| iron-sulfur cluster insertion protein erpa | FD721_02140 | Not Available | + | 456811 - 457152 | 12022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.