Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter, permease protein | FD721_19335 | Not Available | - | 4310720 - 4312315 | 58320.7 |
| thiamine abc transporter substrate binding subunit | FD721_19340 | Not Available | - | 4312388 - 4313377 | 37023.3 |
| duf547 domain-containing protein | FD721_19345 | Not Available | - | 4313629 - 4314429 | 30814.4 |
| 3-isopropylmalate dehydratase small subunit | FD721_19350 | Not Available | - | 4314491 - 4315093 | 22589.5 |
| 3-isopropylmalate dehydratase large subunit | FD721_19355 | Not Available | - | 4315093 - 4316517 | 50678.8 |
| 3-isopropylmalate dehydrogenase | FD721_19360 | Not Available | - | 4316551 - 4317642 | 39481.2 |
| 2-isopropylmalate synthase | FD721_19365 | Not Available | - | 4317670 - 4319211 | 56236.7 |
| transcriptional regulator leuo | FD721_19370 | Not Available | + | 4320057 - 4321013 | 35475.6 |
| long-chain fatty acid--coa ligase | FD721_19375 | Not Available | + | 4321409 - 4323226 | 68769.5 |
| acetolactate synthase 3 large subunit | FD721_19380 | Not Available | + | 4323606 - 4325330 | 62965.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.