Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | FD721_17870 | Not Available | + | 4000910 - 4002841 | 73666.1 |
| translation initiation factor if-3 | FD721_17875 | Not Available | + | 4002845 - 4003396 | 20627.1 |
| 50s ribosomal protein l35 | FD721_17880 | Not Available | + | 4003497 - 4003691 | 7296.28 |
| 50s ribosomal protein l20 | FD721_17885 | Not Available | + | 4003734 - 4004087 | 13476.6 |
| nape protein | FD721_17890 | Not Available | + | 4004880 - 4005050 | 6322.69 |
| pentaheme c-type cytochrome torc | FD721_17895 | Not Available | + | 4005103 - 4006284 | 44292.3 |
| trimethylamine-n-oxide reductase tora | FD721_17900 | Not Available | + | 4006302 - 4008782 | 93582.2 |
| globin | FD721_17905 | Not Available | + | 4008872 - 4009324 | 17136.3 |
| hypothetical protein | FD721_17910 | Not Available | + | 4009492 - 4010271 | 27245.2 |
| lysr family transcriptional regulator | FD721_17915 | Not Available | - | 4010201 - 4011067 | 31441.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.