Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD721_17305 | Not Available | - | 3869709 - 3869921 | 8278.99 |
| d-ribose pyranase | FD721_17310 | Not Available | + | 3870321 - 3870740 | 15158.4 |
| ribose abc transporter atp-binding protein rbsa | FD721_17315 | Not Available | + | 3870799 - 3872304 | 54811.6 |
| ribose abc transporter permease | FD721_17320 | Not Available | + | 3872301 - 3873287 | 34504.1 |
| ribose abc transporter substrate-binding protein rbsb | FD721_17325 | Not Available | + | 3873361 - 3874239 | 30677.0 |
| ribokinase | FD721_17330 | Not Available | + | 3874419 - 3875339 | 32102.5 |
| laci family dna-binding transcriptional regulator | FD721_17335 | Not Available | + | 3875526 - 3876533 | 37626.5 |
| fcd domain-containing protein | FD721_17340 | Not Available | - | 3876756 - 3877454 | 26864.1 |
| glycine cleavage system aminomethyltransferase gcvt | FD721_17345 | Not Available | - | 3877817 - 3878935 | 40975.9 |
| glycine cleavage system protein gcvh | FD721_17350 | Not Available | + | 3879217 - 3879600 | 13596.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.