Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | FD721_17205 | Not Available | - | 3847043 - 3847273 | 8657.54 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | FD721_17210 | Not Available | + | 3847617 - 3848450 | 29245.1 |
| abc transporter atp-binding protein | FD721_17215 | Not Available | + | 3848460 - 3849227 | 28760.8 |
| abc transporter permease | FD721_17220 | Not Available | + | 3849220 - 3850011 | 29121.3 |
| abc transporter atp-binding protein | FD721_17225 | Not Available | + | 3850046 - 3850993 | 34745.7 |
| thiaminase ii | FD721_17230 | Not Available | + | 3851048 - 3851707 | 24897.6 |
| trka family potassium uptake protein | FD721_17235 | Not Available | + | 3852122 - 3852784 | 24079.5 |
| ktr system potassium transporter b | FD721_17240 | Not Available | + | 3852781 - 3854148 | 49298.8 |
| hypothetical protein | FD721_17245 | Not Available | - | 3854205 - 3855038 | 31837.3 |
| sm-20 protein | FD721_17250 | Not Available | + | 3855259 - 3855861 | 23787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.