Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypc/hybg/hupf family hydrogenase formation chaperone | FD721_17090 | Not Available | - | 3819827 - 3820081 | 9323.46 |
| carbamoyltransferase hypf | FD721_17095 | Not Available | - | 3820111 - 3822471 | 87926.2 |
| hypothetical protein | FD721_17100 | Not Available | - | 3822626 - 3823567 | 35418.5 |
| hypothetical protein | FD721_17105 | Not Available | - | 3823901 - 3824188 | 10942.2 |
| duf3316 domain-containing protein | FD721_17110 | Not Available | + | 3824244 - 3824594 | 12999.5 |
| c69 family dipeptidase | FD721_17115 | Not Available | + | 3824984 - 3826456 | 54825.6 |
| pyridoxal phosphate-dependent aminotransferase | FD721_17120 | Not Available | - | 3826593 - 3827762 | 44634.0 |
| na+/h+ antiporter nhac | FD721_17125 | Not Available | - | 3827821 - 3829278 | 51040.6 |
| laci family dna-binding transcriptional regulator | FD721_17130 | Not Available | + | 3829456 - 3830448 | 36582.2 |
| hypothetical protein | FD721_17140 | Not Available | + | 3832856 - 3833488 | 24332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.