Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein m | FD721_16925 | Not Available | + | 3791505 - 3791984 | 18066.8 |
| type ii secretion system protein n | FD721_16930 | Not Available | + | 3791986 - 3792747 | 27397.7 |
| adp compounds hydrolase nude | FD721_16935 | Not Available | + | 3792793 - 3793353 | 20782.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | FD721_16940 | Not Available | + | 3793353 - 3794177 | 30319.4 |
| si-specific nad(p)(+) transhydrogenase | FD721_16945 | Not Available | - | 3794275 - 3795690 | 51889.6 |
| hth-type transcriptional repressor fabr | FD721_16950 | Not Available | + | 3795999 - 3796631 | 23930.7 |
| yijd family membrane protein | FD721_16955 | Not Available | + | 3796655 - 3797035 | 14025.5 |
| trna (uridine(54)-c5)-methyltransferase trma | FD721_16960 | Not Available | - | 3797104 - 3798210 | 43078.1 |
| tonb-dependent receptor | FD721_16965 | Not Available | + | 3798597 - 3800426 | 67772.5 |
| adenine nucleotide alpha hydrolase | FD721_16970 | Not Available | + | 3800477 - 3801148 | 25256.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.