Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase-activating protein | FD721_16775 | Not Available | + | 3758052 - 3758597 | 20684.9 |
| duf2489 domain-containing protein | FD721_16780 | Not Available | + | 3758613 - 3759080 | 17941.9 |
| oxygen-independent coproporphyrinogen iii oxidase | FD721_16785 | Not Available | + | 3759186 - 3760559 | 53259.9 |
| 3'-5' exonuclease | FD721_16790 | Not Available | - | 3760552 - 3761265 | 26663.4 |
| cbs domain-containing protein | FD721_16795 | Not Available | - | 3761262 - 3763124 | 70582.0 |
| adenosine deaminase | FD721_16800 | Not Available | - | 3763577 - 3764581 | 36349.7 |
| nitrogen regulation protein nr(i) | FD721_16805 | Not Available | - | 3764774 - 3766186 | 52774.0 |
| nitrogen regulation protein nr(ii) | FD721_16810 | Not Available | - | 3766204 - 3767265 | 39227.9 |
| duf4124 domain-containing protein | FD721_16815 | Not Available | - | 3767366 - 3767932 | 20965.1 |
| glutamate--ammonia ligase | FD721_16820 | Not Available | - | 3768057 - 3769466 | 51630.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.