Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like serine protease | FD721_00965 | Not Available | + | 179089 - 180105 | 36117.6 |
| arginine decarboxylase | FD721_00970 | Not Available | + | 180119 - 182403 | 85069.9 |
| dihydrofolate reductase | FD721_00980 | Not Available | + | 183687 - 184199 | 19675.7 |
| hypothetical protein | FD721_00985 | Not Available | + | 184282 - 184728 | 16609.6 |
| mate family efflux transporter | FD721_00990 | Not Available | - | 184816 - 185763 | 33836.8 |
| hypothetical protein | FD721_00995 | Not Available | - | 185766 - 186047 | 11173.5 |
| superoxide dismutase family protein | FD721_01000 | Not Available | + | 186334 - 186849 | 18014.8 |
| f0f1 atp synthase subunit epsilon | FD721_01005 | Not Available | - | 187240 - 187680 | 15569.8 |
| f0f1 atp synthase subunit beta | FD721_01010 | Not Available | - | 187691 - 189076 | 49991.0 |
| f0f1 atp synthase subunit gamma | FD721_01015 | Not Available | - | 189097 - 189969 | 32449.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.