Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| capsular biosynthesis protein | FD721_05535 | Not Available | + | 1191557 - 1192285 | 28013.9 |
| lps biosynthesis protein wave | FD721_05540 | Not Available | + | 1192255 - 1193247 | 38356.2 |
| glycosyltransferase family 2 protein | FD721_05545 | Not Available | - | 1193284 - 1194051 | 29048.9 |
| hypothetical protein | FD721_05550 | Not Available | - | 1194073 - 1195020 | 36777.1 |
| cdp-glycerol--glycerophosphate glycerophosphotransferase | FD721_05555 | Not Available | - | 1195021 - 1196076 | 40487.3 |
| 3-deoxy-d-manno-octulosonic acid transferase | FD721_05560 | Not Available | + | 1196240 - 1197511 | 47069.5 |
| 3-deoxy-d-manno-octulosonic acid kinase | FD721_05565 | Not Available | - | 1197508 - 1198212 | 27144.6 |
| glycosyltransferase family 9 protein | FD721_05570 | Not Available | + | 1198304 - 1199335 | 38105.0 |
| pantetheine-phosphate adenylyltransferase | FD721_05575 | Not Available | + | 1199355 - 1199837 | 17834.5 |
| nad-dependent epimerase | FD721_05580 | Not Available | - | 1199900 - 1200904 | 37456.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.