Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3135 domain-containing protein | FD721_05435 | Not Available | + | 1172214 - 1172543 | 12460.3 |
| triose-phosphate isomerase | FD721_05440 | Not Available | + | 1172790 - 1173560 | 26979.1 |
| 6-phosphofructokinase | FD721_05445 | Not Available | - | 1173675 - 1174637 | 34690.0 |
| cpxp family protein | FD721_05450 | Not Available | - | 1175235 - 1175720 | 18517.4 |
| response regulator | FD721_05455 | Not Available | + | 1175911 - 1176600 | 26022.7 |
| envelope stress sensor histidine kinase cpxa | FD721_05460 | Not Available | + | 1176600 - 1177961 | 51834.5 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | FD721_05465 | Not Available | + | 1178055 - 1178519 | 17438.9 |
| serine o-acetyltransferase | FD721_05470 | Not Available | - | 1178577 - 1179398 | 29282.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | FD721_05475 | Not Available | - | 1179530 - 1180546 | 35971.2 |
| protein-export chaperone secb | FD721_05480 | Not Available | - | 1180570 - 1181037 | 17163.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.