Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | FD721_05285 | Not Available | - | 1135784 - 1136374 | 22686.8 |
| pilus assembly protein pils | FD721_05290 | Not Available | - | 1136371 - 1137012 | 24165.3 |
| type iv pilus assembly protein pilm | FD721_05295 | Not Available | - | 1137009 - 1138007 | 37108.9 |
| pbp1a family penicillin-binding protein | FD721_05300 | Not Available | + | 1138299 - 1140731 | 89050.7 |
| dna-binding transcriptional regulator oxyr | FD721_05305 | Not Available | - | 1140819 - 1141718 | 33268.7 |
| glutathione peroxidase | FD721_05310 | Not Available | + | 1141878 - 1142606 | 26575.6 |
| dihydrolipoyl dehydrogenase | FD721_05315 | Not Available | + | 1142688 - 1144139 | 52569.1 |
| argininosuccinate lyase | FD721_05320 | Not Available | - | 1144233 - 1146110 | 69534.6 |
| argininosuccinate synthase | FD721_05325 | Not Available | - | 1146213 - 1147424 | 44320.4 |
| acetylglutamate kinase | FD721_05330 | Not Available | - | 1147502 - 1148284 | 26842.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.