Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 111bp-OG15A
Accession NumberVANG00000000.1
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | FD721_05235 | Not Available | - | 1126270 - 1127292 | 37653.1 |
| phosphoglycolate phosphatase | FD721_05240 | Not Available | - | 1127390 - 1128079 | 25134.2 |
| ribulose-phosphate 3-epimerase | FD721_05245 | Not Available | - | 1128079 - 1128753 | 24789.1 |
| duf2970 domain-containing protein | FD721_05250 | Not Available | + | 1128874 - 1129095 | 8150.59 |
| adenine-specific dna-methyltransferase | FD721_05255 | Not Available | - | 1129079 - 1129921 | 32213.2 |
| hypothetical protein | FD721_05260 | Not Available | - | 1130029 - 1131537 | 55733.0 |
| 3-dehydroquinate synthase | FD721_05265 | Not Available | - | 1131552 - 1132631 | 38817.8 |
| shikimate kinase arok | FD721_05270 | Not Available | - | 1132661 - 1133179 | 19512.1 |
| type iv pilus secretin pilq family protein | FD721_05275 | Not Available | - | 1133509 - 1135260 | 63728.2 |
| pilus assembly protein pilp | FD721_05280 | Not Available | - | 1135260 - 1135775 | 19251.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.