Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria atlantica
Accession NumberCYPS00000000.1
Gene Summary
Adenine Count
1054524 bp
Thymine Count
1045950 bp
Guanine Count
1358557 bp
Cytosine Count
1366897 bp
Genome Length
4825935 bp
Protein-coding Genes
4701 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | RUM4293_04574 | P37584 | + | 4647942 - 4648280 | 12424.1 |
| glycerate dehydrogenase | RUM4293_04575 | B6YWH0 | + | 4648280 - 4649230 | 33826.8 |
| thymidine kinase | RUM4293_04576 | Q5LUY8 | - | 4649227 - 4649805 | 21275.5 |
| hypothetical protein | RUM4293_04577 | Not Available | + | 4650161 - 4650622 | 16890.0 |
| had hydrolase, family ia, variant 3 | RUM4293_04578 | Not Available | + | 4651134 - 4651397 | 9666.62 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | RUM4293_04579 | Q9HYV7 | - | 4651505 - 4652629 | 40978.4 |
| transcriptional repressor mpra | RUM4293_04580 | Not Available | + | 4652798 - 4653265 | 17468.2 |
| multidrug transporter mdta | RUM4293_04581 | Not Available | + | 4653262 - 4654299 | 37109.2 |
| multidrug-efflux transporter mexb | RUM4293_04582 | P25197 | + | 4654311 - 4657358 | 110301.0 |
| hypothetical protein | RUM4293_04583 | Not Available | - | 4657401 - 4658654 | 47655.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.